Base.:*
|
Base.copy
|
Base.delete!
|
Base.empty!
|
Base.getindex
|
Base.haskey
|
Base.iterate
|
Base.length
|
Base.push!
|
Base.setindex!
|
MEDYAN.AgentNames
|
MEDYAN.Boundary
|
MEDYAN.CadherinParams
|
MEDYAN.CadherinState
|
MEDYAN.Context
|
MEDYAN.CubicGrid
|
MEDYAN.Decimated2MonSiteMinAngleRange
|
MEDYAN.Decimated2MonSiteRange
|
MEDYAN.FilamentEndSiteGeneral
|
MEDYAN.FilamentSiteGeneral
|
MEDYAN.Link2MonParams
|
MEDYAN.Link2MonSiteCount
|
MEDYAN.Link2MonSiteMonomerStateMatch
|
MEDYAN.Link2MonSiteMotorCatch
|
MEDYAN.Link2MonSiteMotorStall
|
MEDYAN.Link2MonSiteOne
|
MEDYAN.Link2MonSiteSlipBond
|
MEDYAN.Link2MonState
|
MEDYAN.MembraneSiteDiffusing
|
MEDYAN.MembraneSpeciesParams
|
MEDYAN.MonLink2MonSiteOne
|
MEDYAN.MonomerName
|
MEDYAN.SysDef
|
MEDYAN.VertexName
|
MEDYAN.VertexState
|
MEDYAN.adapt_membranes!
|
MEDYAN.add_decimated_2mon_site!
|
MEDYAN.add_diffusion_coeff!
|
MEDYAN.add_filament_params!
|
MEDYAN.add_link_2mon!
|
MEDYAN.add_link_2mon_site!
|
MEDYAN.add_membranesitereaction!
|
MEDYAN.addcadherin!
|
MEDYAN.addcadherinsite!
|
MEDYAN.adddiffusingcount_rand!
|
MEDYAN.addfilament_reaction!
|
MEDYAN.addfilamentend_reaction!
|
MEDYAN.addfilamentendsite!
|
MEDYAN.addfilamentsite!
|
MEDYAN.addmembranediffusingcount_rand!
|
MEDYAN.addmembranesite!
|
MEDYAN.addpossiblecadherinsite!
|
MEDYAN.addreaction!
|
MEDYAN.addreactioncallback!
|
MEDYAN.addunbindinglink_2mon_site!
|
MEDYAN.boundary_box
|
MEDYAN.boundary_capsule
|
MEDYAN.boundary_cylinder
|
MEDYAN.boundary_plane
|
MEDYAN.centerof
|
MEDYAN.chem_adddiffusingcount!
|
MEDYAN.chem_addfixedcount!
|
MEDYAN.chem_depolymerize!
|
MEDYAN.chem_newfilament!
|
MEDYAN.chem_newlink_2mon!
|
MEDYAN.chem_polymerize!
|
MEDYAN.chem_removefilament!
|
MEDYAN.chem_removelink_2mon!
|
MEDYAN.chem_setlink_2mon_state!
|
MEDYAN.chem_setmonomerstate!
|
MEDYAN.compute_all_membrane_geometry!_system
|
MEDYAN.defer_chem_caching!
|
MEDYAN.fil_mon_states
|
MEDYAN.fil_node_mon_ids
|
MEDYAN.fil_node_positions
|
MEDYAN.fil_num_unmin_ends
|
MEDYAN.filter_grididat
|
MEDYAN.filtype_fil_ids
|
MEDYAN.grididat
|
MEDYAN.is_chem_cache_valid
|
MEDYAN.link_2mon_endnames
|
MEDYAN.link_2mon_state
|
MEDYAN.load_snapshot!
|
MEDYAN.minimize_energy!
|
MEDYAN.mon_3states
|
MEDYAN.mon_exists
|
MEDYAN.mon_minimized
|
MEDYAN.mon_plusvector
|
MEDYAN.mon_position
|
MEDYAN.mon_position_plusvector
|
MEDYAN.newfilament_rand!
|
MEDYAN.newmembrane!
|
MEDYAN.num_filtypes
|
MEDYAN.num_vertexwithstate
|
MEDYAN.randompoint
|
MEDYAN.refresh_chem_cache!
|
MEDYAN.resolve_all_filament_mesh_crossing!
|
MEDYAN.run_chemistry!
|
MEDYAN.set_chemboundary!
|
MEDYAN.set_enable_cylinder_volume_exclusion!
|
MEDYAN.set_mechboundary!
|
MEDYAN.set_time!
|
MEDYAN.sever_filament!
|
MEDYAN.vertex_state
|
NLSolversBase.value!!
|
|
src/auxprocs.jl
|
|
src/boundary.jl
|
|
src/cadherins/possiblecadherinsite.jl
|
|
src/context.jl
|
|
src/decimated_2mon_sites.jl
|
|
src/filamentendsites.jl
|
|
src/filamentsites.jl
|
|
src/grids.jl
|
|
src/link_2mon_sites.jl
|
|
src/membrane/membranesites.jl
|
|
src/membrane/meshadapt.jl
|
|
src/minimize_energy.jl
|
|
src/mon_link_2mon_sites.jl
|
|
src/sever_filament.jl
|
|
src/sys_def.jl
|
|
src/trajectory-io/snapshot.jl
|
|
src/util/math/cuboidslicing.jl
|
|
src/util/stableindex.jl
|