Base.:*
|
Base.copy
|
Base.delete!
|
Base.empty!
|
Base.getindex
|
Base.haskey
|
Base.iterate
|
Base.length
|
Base.push!
|
Base.setindex!
|
MEDYAN.AgentNames
|
MEDYAN.Boundary
|
MEDYAN.Context
|
MEDYAN.CubicGrid
|
MEDYAN.Decimated2MonSiteMinAngleRange
|
MEDYAN.Decimated2MonSiteRange
|
MEDYAN.FilamentEndSiteGeneral
|
MEDYAN.FilamentSiteGeneral
|
MEDYAN.MembraneSiteDiffusing
|
MEDYAN.MembraneSpeciesParams
|
MEDYAN.MonomerName
|
MEDYAN.SysDef
|
MEDYAN.VertexName
|
MEDYAN.VertexState
|
MEDYAN.adapt_membranes!
|
MEDYAN.add_decimated_2mon_site!
|
MEDYAN.add_diffusing_count!
|
MEDYAN.add_diffusion_coeff!
|
MEDYAN.add_filament_params!
|
MEDYAN.add_membranesitereaction!
|
MEDYAN.adddiffusingcount_rand!
|
MEDYAN.addfilament_reaction!
|
MEDYAN.addfilamentend_reaction!
|
MEDYAN.addfilamentendsite!
|
MEDYAN.addfilamentsite!
|
MEDYAN.addmembranediffusingcount_rand!
|
MEDYAN.addmembranesite!
|
MEDYAN.addpossiblecadherinsite!
|
MEDYAN.addreaction!
|
MEDYAN.addreactioncallback!
|
MEDYAN.boundary_box
|
MEDYAN.boundary_capsule
|
MEDYAN.boundary_cylinder
|
MEDYAN.boundary_plane
|
MEDYAN.centerof
|
MEDYAN.chem_adddiffusingcount!
|
MEDYAN.chem_addfixedcount!
|
MEDYAN.compute_all_membrane_geometry!_system
|
MEDYAN.defer_chem_caching!
|
MEDYAN.depolymerize_fila!
|
MEDYAN.fila_mono_states
|
MEDYAN.fila_node_mids
|
MEDYAN.fila_node_positions
|
MEDYAN.fila_num_nodes
|
MEDYAN.fila_num_unmin_ends
|
MEDYAN.fila_tip_tags
|
MEDYAN.filter_grididat
|
MEDYAN.get_all_links
|
MEDYAN.get_all_tags
|
MEDYAN.get_bond_enabled
|
MEDYAN.get_bond_states
|
MEDYAN.get_chem_state
|
MEDYAN.get_directions
|
MEDYAN.get_link_mechanics
|
MEDYAN.get_position
|
MEDYAN.get_reaction_enabled
|
MEDYAN.get_state
|
MEDYAN.grididat
|
MEDYAN.has_tag
|
MEDYAN.is_chem_cache_valid
|
MEDYAN.is_minimized
|
MEDYAN.link2tags
|
MEDYAN.link_exists
|
MEDYAN.load_snapshot!
|
MEDYAN.make_fila!
|
MEDYAN.make_fila_rand!
|
MEDYAN.make_link!
|
MEDYAN.minimize_energy!
|
MEDYAN.newmembrane!
|
MEDYAN.num_directions
|
MEDYAN.num_fila
|
MEDYAN.num_fila_types
|
MEDYAN.num_link_types
|
MEDYAN.num_vertexwithstate
|
MEDYAN.pick_rand_fila_mono_site
|
MEDYAN.pick_rand_fila_tip_site
|
MEDYAN.place2links
|
MEDYAN.place2tag
|
MEDYAN.place_exists
|
MEDYAN.polymerize_fila!
|
MEDYAN.randompoint
|
MEDYAN.refresh_chem_cache!
|
MEDYAN.remove_fila!
|
MEDYAN.remove_link!
|
MEDYAN.resolve_all_filament_mesh_crossing!
|
MEDYAN.run_chemistry!
|
MEDYAN.set_chemboundary!
|
MEDYAN.set_enable_cylinder_volume_exclusion!
|
MEDYAN.set_mechboundary!
|
MEDYAN.set_time!
|
MEDYAN.sever_fila!
|
MEDYAN.tag!
|
MEDYAN.tag2links
|
MEDYAN.tag2place
|
MEDYAN.tag_exists
|
MEDYAN.update_fila_mono_state!
|
MEDYAN.update_link!
|
NLSolversBase.value!!
|
|
src/auxprocs.jl
|
|
src/boundary.jl
|
|
src/cadherins/possiblecadherinsite.jl
|
|
src/context.jl
|
|
src/decimated_2mon_sites.jl
|
|
src/filament/depolymerize_fila.jl
|
|
src/filament/endsites.jl
|
|
src/filament/functions.jl
|
|
src/filament/make_fila.jl
|
|
src/filament/make_fila_rand.jl
|
|
src/filament/polymerize_fila.jl
|
|
src/filament/remove_fila.jl
|
|
src/filament/sever_fila.jl
|
|
src/filament/sites.jl
|
|
src/filament/update_fila_mono_state.jl
|
|
src/grids.jl
|
|
src/links/link-chemistry.jl
|
|
src/links/link-manager.jl
|
|
src/links/place-indexes.jl
|
|
src/links/places.jl
|
|
src/membrane/membranesites.jl
|
|
src/membrane/meshadapt.jl
|
|
src/minimize_energy.jl
|
|
src/sys_def-types.jl
|
|
src/sys_def.jl
|
|
src/trajectory-io/snapshot.jl
|
|
src/util/math/cuboidslicing.jl
|
|
src/util/stableindex.jl
|