src/filament/structs.jl

MEDYAN.FilamentMechParams

Filament mechanical parameters

  • radius::Float64: Cylinder radius (nm)
  • spacing::Float64: Monomer spacing length (nm)
  • klength::Float64: Length force constant (pN/nm)
  • kangle::Float64: Bending force constant (pN*nm/rad²)
  • ktwist::Float64: Twisting force constant (pN*nm/rad²)
  • twist_per_monomer::Float64: Twist between monomers (rad)
  • numpercylinder::Int32: Number of monomers per cylinder
  • kcollide::Float64: Repulsion stiffness (pN/nm)
  • collision_layers::UInt32: Collision layers bitmask. Defines which layers this filament type is on.
  • no_collide_mask::UInt32: No-collide mask bitmask. Bits set = layers this filament type will not collide with.
  • max_num_unmin_end::Int32: Maximum number of unminimized monomers that can be on an end. This should be less than the minimum radius of other filaments + radius divided by spacing.