src/sysdefs.jl
MEDYAN.AgentNames
MEDYAN.SysDef
add_diffusion_coeff!
addreaction!
addreactioncallback!
add_filament_params!
addfilamentsite!
addfilament_reaction!
addfilamentendsite!
addfilamentend_reaction!
MEDYAN.Context
CubicGrid
deepcopy
Base.empty!
load_snapshot!
chem_adddiffusingcount!
chem_addfixedcount!
adddiffusingcount_rand!
set_time!
set_enable_cylinder_volume_exclusion!
set_chemboundary!
set_mechboundary!
make_fila!
make_fila_rand!
remove_fila!
update_fila_mono_state!
polymerize_fila!
depolymerize_fila!
sever_fila!
num_fila_types
num_fila
fila_mono_states
fila_num_nodes
fila_node_mids
fila_node_positions
fila_tip_tags
fila_num_unmin_ends
pick_rand_fila_mono_site
pick_rand_fila_tip_site
tag!
make_link!
remove_link!
update_link!
num_link_types
get_all_links
get_all_tags
tag2links
place2links
tag_exists
place_exists
link_exists
link2tags
tag2place
place2tag
has_tag
get_position
num_directions
get_directions
get_chem_state
get_state
get_bond_states
get_bond_enabled
get_reaction_enabled
is_minimized
get_link_mechanics
run_chemistry!
minimize_energy!
MEDYAN.grididat
MEDYAN.filter_grididat
MEDYAN.centerof